PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.DYV42
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 474aa    MW: 52694.2 Da    PI: 6.8426
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.DYV42genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.69.1e-08386426954
                  HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                   r+RR++i +++  L++++P        K++ a++L +A +Y+k L
  Araip.DYV42 386 ARQRREKISERIRVLQKIVPGG-----SKMDTASMLDEAANYLKFL 426
                  69******************95.....5****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.939377426IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.60E-10383431No hitNo description
SuperFamilySSF474596.94E-14383444IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-12383432IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.9E-12385440IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.3E-5386426IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 474 aa     Download sequence    Send to blast
MDGLSWDLSS QLAANNLAML EGEEDYSIFV NNHMQEMHKS HHRHGYPNSE KVMMMMMSNM  60
VQYPSSATPE AEIVSFPQRT RNNNNNFSMA VKSSSSSSTG WDVKEALTSN HQSWPSLSVV  120
NYVPDFNMAH HHQQQQQQQL INSTTQSSSS LESLDCLLSA TNSNTDTTTA TTSLEEDDGI  180
SIILSDCRNF WNFTTNYGAI TAAAAAASSA ESETNNASNK QNNMQYHHHH QINNNELDET  240
VSQASKRTII NDQYDLIKTS SAAAATTTTG PYFSIFHNSS SSATESGAFK LIKENPLPRS  300
KKPRWENNNN NNNNNKRGGS SSNINFQQPN SSHSSIDEPD PEAIAQMKEM IYRAAAFRPV  360
NLGLEVAEKP KRKNVKISSD PQTVAARQRR EKISERIRVL QKIVPGGSKM DTASMLDEAA  420
NYLKFLRSQV KALESLGNKL DTMNNHNNVP PTTIAFSFNP SFPIMPSYFP NPKP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016170037.10.0PREDICTED: transcription factor bHLH87
TrEMBLA0A151SGZ91e-136A0A151SGZ9_CAJCA; Transcription factor bHLH87
STRINGGLYMA07G01611.11e-132(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45303257
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21330.14e-70bHLH family protein